PUBLICATIONS
1. Chen X, Li J, Gao Z, Yang Y, Kuang W, Dong Y, Chua GH, Huang X, Jiang B, Tian H, Wang Y, Huang X, Li Y, Lam SM*, Shui G*. Endogenous ceramide phosphoethanolamine modulates circadian rhythm via neural-glial coupling in Drosophila, National Science Review, 2022, nwac148,
2. Lam SM, Li J, Sun H, Mao W, Lu Z, Zhao Q, Han C, Gong X, Jiang B, Chua GH, Zhao Z, Meng F*, Shui G*. Quantitative Lipidomics and Spatial MS-Imaging Uncovered Neurological and Systemic Lipid Metabolic Pathways Underlying Troglomorphic Adaptations in Cave-Dwelling Fish. Mol Biol Evol. 2022, 39(4):msac050.
3. Cao M, Zhang S, Lam SM, Shui G*. Hepatic loss of CerS2 induces cell division defects via a mad2-mediated pathway. Clin Transl Med. 2022, 12(1): e712
4. Lam SM, Huang X*, Shui G*. Trends Endocrinol Metab. 2022, 33(8):554-568.
6. Lam SM, Zhang Chao, Wang Z, Ni Z , Zhang S, Yang S, Huang X, Mo L, Li J, Lee B, Mei M, Huang L, Shi M, Xu Z, Meng FP, Cao WJ, Zhou MJ, Shi L, Chua GH, Li B, Cao J, Wang J, Bao S, Wang Y, Song JW*, Zhang F, Wang FS, Shui G*. A multi-omics investigation on the composition and function of extracellular vesicles along the temporal trajectory of COVID-19. Nature Metabolism: 2021, (7):909-922.
7. Lam SM, Wang Z, Li B, Shui G*. High-coverage lipidomics for functional lipid and pathway analyses. Anal Chim Acta. 2021, 1147:199-210.
8. Wang X, Lam SM, Cao M, Wang T, Wang Z, Yu M, Li B, Zhang H, Ping F, Song G, Feng K, Zhang Q, Xu J, Zhou L, Deng M, Zhai X, Xiao X*, Shui G*. Localized increases in CEPT1 and ATGL elevate plasmalogen phosphatidylcholines in HDLs contributing to atheroprotective lipid profiles in hyperglycemic GCK-MODY. Redox Biol. 2021, 40:101855.
9. Song JW#, Lam SM#, Fan X#, Cao WJ, Wang SY, Tian H, CHUA GH, Zhang C, Meng FP, Xu Z, Fu JL, Huang L, Xia P, Yang T, Zhang SH, Li BW, Jiang TJ, Wang RX, Wang ZH, Shi M, Zhang JY*, Wang FS*, Shui G*, Omics-driven systems interrogation of metabolic dysregulation in COVID-19 pathogenesis. Cell Metab. 2020, 32: 188-202.
10. Li P, Wang Z, Lam SM, Shui G*. Rebaudioside A Enhances Resistance to Oxidative Stress and Extends Lifespan and Healthspan in Caenorhabditis elegans. Antioxidants (Basel). 2021, 10:262.
11. Huang S, Guo Y, Li ZW,
Shui G, Tian H, Li BW, Kadeerhan G, Li ZX, Li X, Zhang Y, Zhou T, You WC, Pan KF, Li WQ.
Identification and Validation of Plasma Metabolomic Signatures in Precancerous Gastric Lesions That Progress to Cancer.
JAMA Netw Open. 4(2021): e2114186.
12. Wu L, Liu C, Chang DY, Zhan R, Zhao M, Lam SM, Shui G, Zhao MH, Zheng L, Chen M.
The attenuation of diabetic nephropathy by annexin A1 via regulation of lipid metabolism through AMPK/PPARα/CPT1b pathway. Diabetes. 2021, 70:2192-2203..
13.Li J, Zeng Y, Pan Y, Zhou L, Zhang Z, Guo H, Lou Q,
Shui G, Huang H, Tian H, Guo Y, Yuan P, Yang H, Pan G, Wang R, Zhang H, Yang S, Guo Y, Ge S, Li J, Li Z.
Stepwise selection of natural variations at CTB2 and CTB4a improves cold adaptation during domestication of japonica rice. New Phytol. 231(2021):1056-1072.
14. Xin H, Deng F, Zhou M, Huang R, Ma X, Tian H, Tan Y, Chen X, Deng D,
Shui G, Zhang Z, Li MD.
A multi-tissue multi-omics analysis reveals distinct kineztics in entrainment of diurnal transcriptomes by inverted feeding. iScience. 24(2021):102335.
15. Zhou X, Gao Y, Wang W, Yang X, Yang X, Liu F, Tang Y, Lam SM, Shui G, Yu L, Tian C, Guddat LW, Wang Q, Rao Z, Gong H. PNAS;118(2021): e2022308118.
17. Li J, Zeng Y, Pan Y, Zhou L, Zhang Z, Guo H, Lou Q, Shui G, Huang H, Tian H, Guo Y, Yuan P, Yang H, Pan G, Wang R, Zhang H, Yang S, Guo Y, Ge S, Li J, Li Z. Stepwise selection of natural variations at CTB2 and CTB4a improves cold adaptation during domestication of japonica rice. New Phytol.: 231(2021):1056-1072.
18. Shen L, Hu P, Zhang Y, Ji Z, Shan X, Ni L, Ning N, Wang J, Tian H, Shui G, Yuan Y, Li G, Zheng H, Yang XP, Huang D, Feng X, Li MJ, Liu Z, Wang T, Yu Q. Serine metabolism antagonizes antiviral innate immunity by preventing ATP6V0d2-mediated YAP lysosomal degradation. Cell Metab. 2021 33(2021):971-987.
19. Pang Q, Liu C, Qiao Y, Zhao J, Lam SM, Mei M, Shui G, Bao S, Li Q. GM130 regulates pulmonary surfactant protein secretion in alveolar type II cells. Sci China Life Sci. 2021. doi: 10.1007/s11427-020-1875-x.
20. Ye J, Ye X, Jiang W, Lu C, Geng X, Zhao C, Ma Y, Yang P, Man Lam S, Shui G, Yang T, Zhong Li J, Gong Y, Fu Z, Zhou H. Targeted lipidomics reveals associations between serum sphingolipids and insulin sensitivity measured by the hyperinsulinemic-euglycemic clamp. Diabetes Res Clin Pract. 173(2021):108699.
21. Xing G, Li J, Li W, Lam SM, Yuan H, Shui G, Yang J. AP2/ERF and R2R3-MYB family transcription factors: potential associations between temperature stress and lipid metabolism in Auxenochlorella protothecoides. Biotechnol Biofuels. 2021, 14:22.
23.
Zhang C,
Hao C,
Shui G*,
Li W*. BLOS1 mediates kinesin switch during endosomal recycling of LDL receptor.
Elife, 2020, 9:e58069.
24. Shi Y, Lam SM, Liu H, Luo G, Zhang J, Yao S, Li J, Zheng L, Xu N, Zhang X*, Shui G*. Comprehensive lipidomics in apoM-/- mice reveals an overall state of metabolic distress and attenuated hepatic lipid secretion into the circulation. J Genet. Genomics. 47(2020):523-534.
25. Wojnacki J, Nola S, Bun P, Cholley B, Filippini F, Pressé MT, Lipecka J, Man Lam S, N’guyen J, Simon A, Ouslimani A, Shui G, Fader CM, Colombo MI, Guerrera IC, Galli T. Cell Rep. 2020, 33:108536.
26. Gong H, Gao Y, Zhou X, Xiao Y, Wang W, Tang Y, Zhou S, Zhang Y, Ji W, Yu L, Tian C, Lam SM, Shui G, Guddat LW, Wong LL, Wang Q, Rao Z. Nat Commun. 2020, 11(1):4245.
27. He M, Su J, Xu Y, Chen J, Chern M, Lei M, Qi T, Wang Z, Ryder LS, Tang B, Osés-Ruiz M, Zhu K, Cao Y, Yan X, Eisermann I, Luo Y, Li W, Wang J, Yin J, Lam SM, Peng G, Sun X, Zhu X, Ma B, Wang J, Liu J, Qing H, Song L, Wang L, Hou Q, Qin P, Li Y, Fan J, Li D, Wang Y, Wang X, Jiang L, Shui G, Xia Y, Gong G, Huang F, Wang W, Wu X, Li P, Zhu L, Li S, Talbot NJ, Chen X. Discovery of broad-spectrum fungicides that block septin-dependent infection processes of pathogenic fungi. Nat Microbiol. 2020, 5:1565-1575..
28. Lam SM#, Zhou TX#, Li J#, Zhang SH, Chua GH, Li BW, Shui G*. A robust, integrated platform for comprehensive analyses of acyl-coenzyme As and acyl-carnitines revealed chain length-dependent disparity in fatty acyl metabolic fates across Drosophila development. Science Bulletin, 65(2020), 1840-1848.
29. Yang L, Liang J, Lam SM, Yavuz A, Shui G, Ding M, Huang X. Neuronal lipolysis participates in PUFA-mediated neural function and neurodegeneration. EMBO Rep. 2020, 21:e50214.
30. Meng W, Xu L, Du ZY, Wang F, Zhang R, Song X, Lam SM, Shui G, Li Y, Chye ML. Rice (N Y). 2020, 13:75.
31. Liu RQ, Qiao SH, Shen WS, Liu Y, Lu Y, Huang LY, Guo Z, Gong JF, Shui G, Li Y, Zhu WM*. Disturbance of Fatty Acid Desaturation Mediated by FADS2 in Mesenteric Adipocytes Contributes to Chronic Inflammation of Crohn’s Disease. J Crohns Colitis. DOI: 10.1093/ecco-jcc/jjaa086.
32. Wei L, Yue F, Xing L, Wu S, Shi Y, Li J, Xiang X, Lam SM, Shui G, Russell R, Zhang D. Front Microbiol. 2020, 11:1975. Constant Light Exposure Alters Gut Microbiota and Promotes the Progression of Steatohepatitis in High Fat Diet Rats. Front Microbiol. 2020,11:1975
33. Li R, Wang YX, Hou BY, Lam SM, Zhang WH, Chen RC, Shui G, Sun QH, Qiang GF, Liu CQ*. Lipidomics Insight Into Chronic Exposure to Ambient Air Pollution in Mice. Environ Pollut. 2020 Jul;262:114668.
34. Li R, Sun Q, Lam SM, Chen R, Zhu J, Gu W, Zhang L, Tian H, Zhang K, Chen LC, Sun Q, Shui G*, Liu C*. Sex-dependent effects of ambient PM2.5 pollution on insulin sensitivity and hepatic lipid metabolism in mice. Part Fibre Toxicol. 2020, 17(1):14.
35. Quan LH, Zhang C, Dong MJiang J, Xu H, Yan C, Liu X, Zhou H, Zhang H, Chen L, Zhong FL, Luo ZB, Lam SM, Shui G, Li D, Jin W. Myristoleic acid produced by enterococci reduces obesity through brown adipose tissue activation. Gut. 2020，69(7):1239-1247.
36. Wang W, Li S, Li Z, Zhang J, Fan K, Tan G, Ai G, Lam SM, Shui G, Yang Z, Lu H, Jin P, Li Y, Chen X, Xia X, Liu X, Dannelly HK, Yang C, Yang Y, Zhang S, Alterovitz G, Xiang W, Zhang L. Harnessing the intracellular triacylglycerols for titer improvement of polyketides in Streptomyces. Nat Biotechnol. 2020, 38(1):76-83.
37. Che L, Chi W, Qiao Y, Zhang J, Song X, Liu Y, Li L, Jia J, Pilo M8, Wang J, Cigliano A, Ma Z, Kuang W, Tang Z, Zhang Z, Shui G, Ribback S, Dombrowski F, Evert M, Pascale RM, Cossu C, Pes GM, Osborne TF, Calvisi DF Chen X, Chen L. Cholesterol biosynthesis supports the growth of hepatocarcinoma lesions depleted of fatty acid synthase in mice and humans. Gut. 2020, 69(1):177-186.
38. Hou B, He P, Ma P, Yang X, Xu C, Lam SM, Shui G, Yang X, Zhang L, Qiang G, Du G. Comprehensive Lipidome Profiling of the Kidney in Early-Stage Diabetic Nephropathy. Front Endocrinol (Lausanne). 2020, 11:359.
39.
Shi JH,
Lu JY,
Chen HY,
Wei CC,
Xu X,
Li H,
Bai Q,
Xia FZ,
Lam SM,
Zhang H,
Shi YN,
Cao D,
Chen L,
Shui G,
Yang X,
Lu Y,
Chen YX,
Zhang WJ. Liver ChREBP Protects Against Fructose-Induced Glycogenic Hepatotoxicity by Regulating L-Type Pyruvate Kinase.
Diabetes. 2020; 69(4):591-602.
40.
Tian H,
Zhou Z,
Shui G*,
Lam SM*. Extensive Profiling of Polyphenols from two Trollius Species Using a Combination of Untargeted and Targeted Approaches.
Metabolites. 2020 Mar 23;10(3).
41.
Zhao H,
Ma B,
Duan KX,
Li XK,
Lu X,
Yin CC,
Tao JJ,
Wei W,
Zhang WK,
Xin P,
Lam SM,
Chu J,
Shui G,
Chen SY,
Zhang JS. The GDSL Lipase MHZ11 Modulates Ethylene Signaling in Rice Roots.
Plant Cell. 2020 Mar 17. doi: 10.1105.
42. Li X, Shi Z, Zhu Y, Shen T, Wang H, Shui G, Loor JJ, Fang Z, Chen M, Wang X, Peng Z, Song Y, Wang Z1, Du X, Liu G. Cyanidin-3-O-glucoside improves non-alcoholic fatty liver disease by promoting PINK1-mediated mitophagy in mice. Br J Pharmacol. 2020 (in press) doi: 10.1111.
43.
Hou B,
Zhao Y,
He P,
Xu C,
Ma P,
Lam SM,
Li B,
Gil V,
Shui G,
Qiang G,
Liew CW,
Du G. Targeted lipidomics and transcriptomics profiling reveal the heterogeneity of visceral and subcutaneous white adipose tissue.
Life Sci. 2020 Mar 15;245:117352.
44.
Wu L,
Zhang X,
Zheng L,
Zhao H,
Yan G,
Zhang Q,
Zhou Y,
Lei J,
Zhang J,
Wang J,
Xin R,
Jiang L,
Peng J,
Chen Q,
Lam SM,
Shui G,
Miao H,
Li Y. RIPK3 Orchestrates Fatty Acid Metabolism in Tumor-Associated Macrophages and Hepatocarcinogenesis.
Cancer Immunol Res. 2020 Mar 2. doi: 10.1158.
45. Wang R，Li B，Lam SM*，Shui G*. Integration of lipidomics and metabolomics for in-depth understanding of cellular mechanism and disease progression. J Genet. Genomics. 2020 Feb 20;47(2):69-83.
46.
Yue F,
Xia K,
Wei L,
Xing L,
Wu S,
Shi Y,
Lam SM,
Shui G,
Xiang X,
Russell R,
Zhang D.
Effects of constant light exposure on sphingolipidomics and progression of NASH in high-fat-fed rats.
J Gastroenterol Hepatol. 2020 Feb 6. doi: 10.1111.
47. Chen Y, Lin C, Guo Z, Zhao S, Zhu Y, Huang F, Shui G, Lam SM, Pu J, Yan Y, Liu Z, Zhang B. Altered Expression Profile of Phosphatidylinositols in Erythrocytes of Alzheimer’s Disease and Amnestic Mild Cognitive Impairment Patients. J Alzheimers Dis. 2020;73(2):811-818.
48. Huang D, Sun Y, Ma Z, Ke M, Cui Y, Chen Z, Chen C, Ji C, Tran TM, Yang L, Lam SM, Han Y, Shui G, Friml J, Miao Y, Jiang L, Chen X. Salicylic acid-mediated plasmodesmal closure via Remorin-dependent lipid organization. Proc Natl Acad Sci. 2019, 116(42): 21274-21284.
49. Sun X, Li X, Jia H, Wang H, Shui G, Qin Y, Shu X, Wang Y, Dong J, Liu G, Li X. Nrf2 mediates oxidative stress-induced lipid accumulation in adipocytes by increasing adipogenesis and decreasing lipolysis. Antioxid Redox Signal. 2020, 32(3):173-192.
50. Lu J#, Lam SM#, Wan Q, Shi L, Huo Y, Chen L, Tang X, Li B, Wu X, Peng K, Li M, Wang S, Xu Y, Xu M, Bi Y, Ning G, Shui G*, Wang W*. High-Coverage Targeted Lipidomics Reveals Novel Serum Lipid Predictors and Lipid Pathway Dysregulation Antecedent to Type 2 Diabetes Onset in Normoglycemic Chinese Adults. Diabetes Care. 42(2019):2117-2126.
51. Yang X, Liang J, Ding L, Li X, Lam SM, Shui G, Ding M, Huang X. Phosphatidylserine synthase regulates cellular homeostasis through distinct metabolic mechanisms. PLoS Genet. 2019,15(12):e1008548.
52. He P, Hou B, Li Y, Xu C, Ma P, Lam SM, Gil V, Yang X, Yang X, Zhang L, Shui G, Song J, Qiang G, Liew CW, Du G. Lipid Profiling Reveals Browning Heterogeneity of White Adipose Tissue by Β3-Adrenergic Stimulation. Biomolecules. 2019, 9,444
53. Chen L, Ma MY, Sun M, Jiang LY, Zhao XT, Fang XX, Lam SM, Shui GH, Luo J, Shi XJ, Song BL. Endogenous sterol intermediates of the mevalonate pathway regulate HMG-CoA reductase degradation and SREBP-2 processing. J Lipid Res. 60(2019):1765-1775.
54. Pan J, Tao C, Cao C, Zheng Q, Lam SM, Shui G, Liu X, Li K, Zhao J, Wang Y. Adipose lipidomics and RNA-Seq analysis revealed the enhanced mitochondrial function in UCP1 knock-in pigs. Biochim Biophys Acta Mol Cell Biol Lipids. 1864(2019):1375-1383.
55. Cao Z, Hao Y, Fung CW, Lee YY, Wang P, Li X, Xie K, Lam WJ, Qiu Y, Tang BZ, Shui G, Liu P, Qu J, Kang BH, Mak HY. Dietary fatty acids promote lipid droplet diversity through seipin enrichment in an ER subdomain. Nat Commun. 10(2019):2902.
56. Pan S, Lin Y, Liu Q, Duan J, Lin Z, Wang Y, Wang X, Lam SM, Zou Z, Shui G, Zhang Y, Zhang Z, Zhan X. Convergent genomic signatures of flight loss in birds suggest a switch of main fuel. Nat Commun. 2019, 10(1):2756.
57. Li B, Li L, Li M, Lam SM, Wang G, Wu Y, Zhang H, Niu C, Zhang X, Liu X, Hambly C, Jin W, Shui G, Speakman JR. Microbiota Depletion Impairs Thermogenesis of Brown Adipose Tissue and Browning of White Adipose Tissue. Cell Rep. 2019, 26(10):2720-2737.
58. Wang XH, Su M, Gao F, Xie W, Zeng Y, Li DL, Liu XL, Zhao H, Qin L, Li F, Liu Q, Clarke OB, Lam SM, Shui GH, Hendrickson WA, Chen YH. Structural basis for activity of TRIC counter-ion channels in calcium release. Proc Natl Acad Sci. 2019, 116(10): 4238-43.
59. Liu Y, Ji Y, Li X, Shui G, Huang X. Lipid storage regulator CdsA is essential for Drosophila metamorphosis. J Genet Genomics. 2019, 46(4):231-234.
60. Wang X, Cao C, Li Y, Hai T, Jia Q, Zhang Y, Zheng Q, Yao J, Qin G, Zhang H, Song R, Wang Y, Shui G, Lam SM, Liu Z, Wei H, Meng A, Zhou Q, Zhao J. A harlequin ichthyosis pig model with a novel ABCA12 mutation can be rescued by acitretin treatment. J Mol Cell Biol. 2019, 11(12):1029-1041.
61. Ma J, Wang R, Lam SM, Zhang C, Shui G*, Li W*. Plasma lipidomic profiling in murine mutants of Hermansky-Pudlak syndrome reveals differential changes in pro- and anti-atherosclerotic lipids. Biosci Rep. 2019, 39(2): BSR20182339.
62. Wang W, Xin J, Yang X, Lam SM, Shui G*, Wang Y*, Huang X*. Lipid-gene regulatory network reveals coregulations of triacylglycerol with phosphatidylinositol/lysophosphatidylinositol and with hexosyl-ceramide. Biochim Biophys Acta Mol Cell Biol Lipids. 2018, 1864(2):168-180.
63. Gong H, Li J, Xu A, Tang Y, Ji W, Gao R, Wang S, Yu L, Tian C, Li J, Yen HY, Man Lam S,
Shui G, Yang X, Sun Y, Li X, Jia M, Yang C, Jiang B, Lou Z, Robinson CV, Wong LL, Guddat LW, Sun F, Wang Q, Rao Z.
An electron transfer path connects subunits of a mycobacterial respiratory supercomplex. Science. 2018, 362(6418).
65. Zhang F, Wang Y, Wang T, Yao L, Lam SM, Huang X, Fan J, Wang Q, Liu L, Jiang Y, Zhang H, Shi L, Yu M,
Shui G, Wang Y, Gao F, Zhang X, Xu Z.
cTAGE5/MEA6 plays a critical role in neuronal cellular components trafficking and brain development.
PNAS. 2018, 115(40):E9449-E9458.
66. Deng X, Yuan S, Cao H, Lam SM, Shui G, Hong Y, Wang X. Phosphatidylinositol-hydrolyzing phospholipase C4 modulates rice response to salt and drought. Plant Cell Environ. 2019;42(2):536-548.
67. Ding L, Yang X, Tian H, Liang J, Zhang F, Wang G, Wang Y, Ding M, Shui G, Huang X.EMBO J. Seipin regulates lipid homeostasis by ensuring calcium-dependent mitochondrial metabolism. EMBO J. 2018, 37(17): e97572.
68.Li TY, Song L, Sun Y, Li J, Yi C, Lam SM, Xu D, Zhou L, Li X, Yang Y, Zhang CS, Xie C, Huang X, Shui G, Lin SY, Reue K, Lin SC. Tip60-mediated lipin 1 acetylation and ER translocation determine triacylglycerol synthesis rate. Nat Commun. 2018, 15;9(1):1916.
69. Liao J, Guan Y, Chen W, Shi C, Yao D, Wang F, Lam SM, Shui G, Cao X. ACBD3 is required for FAPP2 transferring glucosylceramide through maintaining the Golgi integrity. J Mol Cell Biol. 2019;11(2):107-117..
72. Gao M, Yin X, Yang W, Lam SM, Tong X, Liu J, Wang X, Li Q, Shui G, He Z, GDSL lipases modulate immunity through lipid homeostasis in rice. PLoS pathogens 2017, 13(11):e1006724.
73. Tian H, Li B, Shui G*, Untargeted LC–MS Data Preprocessing in Metabolomics. Journal of Analysis and Testing 2017, 1:187-192.
74. Lam SM, Wang Z, Li J, Huang X, Shui G*: Sequestration of polyunsaturated fatty acids in membrane phospholipids of Caenorhabditis elegans dauer larva attenuates eicosanoid biosynthesis for prolonged survival. Redox Biol 2017(12), 12:967-977.
75. Yan Y, Wang H, Hu M, Jiang L, Wang Y, Liu P, Liang X, Liu J, Li C, Lindstrom-Battle A , Lam SM, Shui G, Deng W, Jiao R*, HDAC6 Suppresses Age-Dependent Ectopic Fat Accumulation by Maintaining the Proteostasis of PLIN2 in Drosophila. Dev Cell 2017, 43(1):99-111.
76. Zhang J, Zhang Y, Wu W, Wang F, Liu X, Shui G, Nie CL: Guanylate-binding protein 2 regulates Drp1-mediated mitochondrial fission to suppress breast cancer cell invasion. Cell Death Dis 2017, 8(10):e3151
77. Lam SM, Tian H, Shui G*: Lipidomics, en route to accurate quantitation. BBA-Mol Cell Biol L 2017, 1862(8):752-761.
78. Fan W, Lam SM, Xin J, Yang X, Liu Z, Liu Y, Wang Y, Shui G, Huang X: Drosophila TRF2 and TAF9 regulate lipid droplet size and phospholipid fatty acid composition. Plos Genet 2017, 13(3) :e1006664.
79. Lam SM, Wang Y, Li B, Du J, Shui G*: Metabolomics through the lens of precision cardiovascular medicine. J Genet Genomics 2017, 44(3):127-138.
80. Li Q, Lu X, Song Q, Chen H, Wei W, Tao J, Bian X, Shen M, Ma B, Zhang W, Bi Y, Li W, Lai Y, Lam SM, Shui G, Chen S, Zhang J, Selection for a Zinc-Finger Protein Contributes to Seed Oil Increase during Soybean Domestication. Plant Physiol 2017, 173(4):2208-2224.
81. Su X, Liu S, Zhang X, Lam SM, Hu X, Zhou Y, Chen J, Wang Y, Wu C, Shui G, Lu MJ, Pei RJ, Chen XW*: Requirement of cytosolic phospholipase A2 gamma in lipid droplet formation. BBA-Mol Cell Biol L 2017, 1862(7):692-705.
82. Tian H, Lam SM, Shui G*. Metabolomics, a Powerful Tool for Agricultural Research. Int J Mol Sci 11(2016):1871.
83. Huang Y, Huang S, Lam SM, Liu Z, Shui G, Zhang YQ. Acsl, the Drosophila ortholog of intellectual-disability-related ACSL4, inhibits synaptic growth by altered lipids. J Cell Sci 129(2016):4034-4045.
84. Lam SM, Chua GH, Li XJ, Su B, Shui G*. Biological relevance of fatty acyl heterogeneity to the neural membrane dynamics of Rhesus macaques during normative aging. Oncotarget 7 (2016): 55970-89.
85.Wang Y, Liu L, Zhang H, Fan J, Zhang F, Yu M, Shi L, Yang L, Lam SM, Wang H, Chen X, Wang Y, Gao F,
Shui G, Xu Z.
Mea6 controls VLDL transport through the coordinated regulation of COPII assembly. Cell Res. 26(2016):787-804.
89. Xiang Y, Lam SM, Shui G*. What can lipidomics tell us about the pathogenesis of Alzheimer disease? Biol Chem. 396(2015):1281-91
90. Heinz LX, Baumann CL, K？berlin MS, Snijder B, Gawish R, Shui G, et al. The Lipid-Modifying Enzyme SMPDL3B Negatively Regulates Innate Immunity. Cell Rep. 11(2015):1919-28.
91. Chua EC, Shui G, Cazenave-Gassiot A, Wenk MR, Gooley JJ. Changes in Plasma Lipids during Exposure to Total Sleep Deprivation. Sleep. 38(2015):1683-91.
95. Cheong WF, Wenk MR, Shui G*. Comprehensive compositional study of lipid molecular species in crude palm oil using multiple lipidomic approaches. J Genet Genomics. 41(2014):293-304
96. Guyen LN, Ma D, Shui G, Wong P, Cazenave-Gassiot A, Zhang XD, Wenk MR, Goh ELK, Silver DL. Mfsd2a is a transporter for the essential omega-3 fatty acid docosahexaenoic acid. Nature 509(2014):503-6.
98. Liu L, Jiang Q, Wang X, Zhang Y, Lin RC, Lam SM,
Shui G, Zhou L, Li P, Wang Y, Cui X, Gao M, Zhang L, Lv Y, Xu G, Liu G, Zhao D, Yang H.
Adipose-specific knockout of Seipin/Bscl2 results in progressive lipodystrophy. Diabetes, 63(2014):2320-31.
101. Liu YF, Li QT, Lu X, Song QX, Lam SM, Zhang WK, Ma B, Lin Q, Man WQ, Du WG,
Shui GH, Chen SY, Zhang JS.
Soybean GmMYB73 promotes lipid accumulation in transgenic plants. BMC Plant Biol. 14(2014):73.
102. Lam S.M., Wang Y., Duan XR, Wenk MR, Kalaria,RN, Chen CP, Lai MKP，Shui G*. The brain lipidomes of subcortical ischemic vascular dementia and mixed dementia. Neurobiology of Aging, 35(2014):2369-81.
103. Ang ML, Zainul Rahim SZ, Shui G, et al, Alonso S. An ethA/R-deficient Mycobacterium bovis BCG mutant displays increased adherence to mammalian cells and greater persistence in vivo which correlate with altered mycolic acids composition. Infection and Immunity 82(2014):1850-9.
104. Liu Y, Wang W, Shui G*, Huang X*. CDP-diacylglycerol synthetase coordinates cell growth and fat storage through phosphatidylinositol metabolism and the insulin pathway. Plos Genetics. 10(2014), e1004172.
112. Liu Z, Lim CY, Su MY, Soh SL, Shui G, Wenk MR, Grove KL, Radda GK, Han W, Xiao X. Neonatal overnutrition in mice exacerbates high-fat diet-induced metabolic perturbations. J Endocrinol. 219(2013):131-43.
113. Lam SM, Tong L, Reux B, Lear MJ, Wenk MR, Shui G*. Rapid and sensitive profiling of tear wax ester species using high performance liquid chromatography coupled with tandem mass spectrometry. J. Chromatogr. A. 1308(2013):166-71.
114. Chua ECP#, Shui G#, Lee I, Lau P; Tan LC, Yeo SY, Lam BD, Puvanendran K, Bulchand S, Summers SA, Rozen S, Wenk MR, Gooley JJ. Extensive diversity in the circadian lipidome: evidence for different circadian metabotypes. PNAS. 110(2013):14468-73. (#co-first author).
115. Shui G*, Lam SM, Stebbins J, Kusunoki J, Duan X, Li B, Wei Cheong F, Soon D, Kelly R, & Wenk M Polar lipid derangements in type 2 diabetes mellitus: potential pathological relevance of fatty acyl heterogeneity in sphingolipid. Metabolomics 4(2013) 786-799.
116. Lim WL, Lam SM,
Shui G, Mondal A, Ong D, Duan X, Creegan R, Martins IJ, Sharman MJ, Taddei K, Verdile G, Wenk MR, Martins RN.
Effects of a high-fat, high-cholesterol diet on brain lipid profiles in apolipoprotein E ε3 and ε4 knock-in mice. Neurobiol Aging 34(2013):2217-24.
118. Jovanovi？ V, Abdul Aziz N, Lim YT, Ng Ai Poh A, Jin Hui Chan S, Ho Xin Pei E, Lew FC,
Shui G, Jenner AM, Bowen L, McKinney EF, Lyons PA, Kemeny MD, Smith KG, Wenk MR, Macary PA.
Lipid anti-lipid antibody responses correlate with disease activity in systemic lupus erythematosus. PLoS One 8(2013)：e55639.
119. Blanc M, Hsieh wy, Robertson KA, Kai KA, Forster T, Shui G, Lacaze P, Watterson S, Griffiths SJ, Spann NJ, Meljon A, Talbot S, Krishnan K, Covey DF, Wenk MR, Craigon M, Ruzsics Z, Haas J, Angulo A, Griffiths WJ, Glass CK, Wang Y, Ghazal P. Signal transducer and activator of transcription (Stat-1) couples macrophage synthesis of 25-hydroxycholesterol to the interferon antiviral response. Immunity 38(2013):106-18.
120. Guan XL, Cestra G，Shui G, Kuhrs A, Schittenhelm R, Hafen E, van der Goot FG, Gonzalez-Gaitan M, Wenk MR. Biochemical membrane lipidomics during Drosophila development -an informational resource. Development Cell 24(2013):98-111.
121. Summermatter S, Shui G, Maag D, Santos G, Wenk MR, Handschin C. PGC-1α improves glucose homeostasis in skeletal muscle in an activity-dependent manner. Diabetes 62(2013):85-95
122. Vigant F, Lee J, Hollman A, Tanner L, Akyol-Ataman Z, Yun T, Shui G, et al. A mechanistic paradigm for broad-spectrum antivirals that target virus-cell fusion. Plos Pathogens 9(2013): e1003297.
123. Watterson S, Guerriero ML, Blanc M, Mazein A, Loewe L, Robertson KA, Gibb H, Shui G, Wenk MR, Hillston J and Ghazal P. A model of flux regulation in the cholesterol biosynthesis pathway: Immune mediated graduated flux reduction versus statin-like led stepped flux reduction. Biochimie 95(2013):613-21.
124. Nakatsu F, Baskin JM, Chung J, Tanner LB, Shui G, Lee SY, Pirruccello M, Ingolia NT, Wenk MR, Camilli PD. A plasma membrane PI4P pool controlled by PI 4-kinase III impacts cholesterol homeostasis. J Cell Biol. 199(2012):1003-1016.
125. Thibault G, Shui G, Woong K, McAlister G, Gygi SP, Wenk MR, Ng DTW. The unfolded protein response buffers the lethal effects of lipid disequilibrium. Molecular Cell: 48(2012):16-27.
126. Patkar RN, Suresh A, Xue YK, Shui G, Wenk MR, Naqvi NI. Abc3-mediated efflux of an endogenous digoxin-like steroidal glycoside by Magnaporthe oryzae is necessary for host invasion during blast disease. Plos Pathogen 8(2012):e1002888.
128. Bikman BT, Guan Y, Shui G, Siddique MM, Holland WL, Kim JY, Fabriàs G, Wenk MR, Summers SA. Fenretinide prevents lipid-induced insulin resistance by inhibiting dihydroceramide desaturase and blocking ceramide synthesis. J. Bio. Chem. 287(2012):17426-37.
129. Tan SH, Shui G, Zhou J, Wenk MR, Shen HM. Induction of autophagy by palmitic acid via a PKC-mediated signaling pathway independent of Mtor. J. Bio. Chem. 287(2012):14364-76.
130. Mathuru AS, Kibat C, Cheong CF, Shui G, Korzh V, Wenk MR, Friedrich RW and Jesuthasan S. Chondroitin fragments are odorants that trigger fear behavior. Current Biology 22(2012):538-44.
131. Rodriguez-Navarro JA, Kaushik S, Koga H, Dall’Armi C, Shui G, Wenk MR, Di Paolo G, Cuervo AM. Inhibitory effect of dietary lipids on chaperone-mediated autophagy. PNAS 109(2012):E705-14 .
132. Wang WS, Lv Na, Zhang S, Shui G, Qian H, Zhang J, Chen Y, Ye J, Xie Y, Shen Y, Wenk MR, Li P. Cidea is an essential transcriptional co-activator of C/EBP|？ to control newborn survival and lipid secretion in mammary gland. Nature Medicine 18(2012):235-43.
134. Chan R, Oliveira TG, Small SA, Duff KE, Wenk MR, Shui G*, Di Paolo G*. Comparative lipidomic analysis of mouse and human brain with Alzheimer disease. J. Bio. Chem. 287(2012):2678-88.
135. Poh MK, Shui G, Shi PY, Wenk MR, Gu F. The importance of cholesterol during the entry and replication event of dengue virus. Antiviral Res: 93(2012):191-8.
136.Shui G*, et al. Mycolic acids as diagnostic markers for tuberculosis case detection and drug efficacy. EMBO Mol Med: 4(2012):27-37.
137. Gong J, Sun Z, Wu L, Xu W，Schieber N,Xu D, Shui G, Yang H, Parton RG, Li P. Fsp27 is localized to the contact site of lipid droplets and promotes their growth by fusion. J Cell Biol: 195(2011):953-63.
138. Lee HW, Tan CH, Long LY, Farooqui AQ, Shui G, Wenk MR, Ong WY. Lipidomic analyses of the rat brain after transcranial magnetic stimulation. Metabolomics: 8(2012): 19-33.
139. Lee HW, Tan CH, Shui G, Wenk MR, Ong WY. Role of prefrontal cortex calcium independent phospholipase A2 activity in the antidepressant like effect of maprotiline. Int J Neuropsychopharmacol. 15(2012):1087-98.
140. Ma MT; Yeo JF; Shui G, Wenk MR, Ong WY. Systems wide analyses of lipids in the brainstem during inflammatory orofacial pain -Evidence of increased phospholipase A(2) activity. Eur J Pain 16(2012):38-48.
141. Lim L, Jackson-Lewis V, Wong LC, Shui G, Goh XH, Kesavapany S, Jenner AM, Fivaz M, Przedborski S, Wenk MR. Lanosterol induces mitochondrial uncoupling and protects dopaminergic neurons from oxidative stress. Cell Death and Diff.19(2012): 416-27.
143. Fei W, Li H, Shui G, Bielby C, Du X, Brown AJ, Wenk MR, Li P, Yang H. Molecular characterization of seipin and its mutants: implications for seipin in triacylglycerol synthesis. J Lipid Res 52(2011):2136-47.
144. Lam SM, Tong L, Yong SS, Li BW, Chaurasia SS, Shui G*, Wenk MR*. Meibum lipid composition in Asians with Dry Eye Disease. Plos One 6(2011): e24339
145. Fei W#, Shui G#, Zhang P, Fergsuon C, Kapterian TS, Lin RC, Dawes IW, Zhang Y, Brown AJ, Li P, Huang X, Parton RG, Wenk MR, Walther TC and Yang H. A role for phosphatidic acid in the formation of “supersized” lipid droplets. Plos Genetics7(2011): e1002201. (#co-first author).
146.Shui G*. Systems level analysis of lipidome. Front. Biol. 6(2011): 183-189
147. Gruber J, Ng LF, Fong S, Wong YT, Koh SA, Chen CB, Shui G, Cheong WF, Schaffer S, Wenk MR, Halliwell B. Mitochondrial ageing in Caenorhabditis elegans - shutting down rather than vicious cycling. Plos One 6 (2011): e19444
148.Shui G*, Cheong WF, Jappar IA, Hoi A, Xue YK, Fernandis AZ, Tan BKH, Wenk MR. Derivatization-independent cholesterol analysis in crude lipid extracts by liquid chromatography/mass spectrometry: Applications to a rabbit model for atherosclerosis. J. Chromatogr. A. 1218 (2011): 4357-4365.
150. Tian Y, Bi J, Shui G, Xiang Y, Liu Y, Liu Z, Yang H, Wenk MR, and Huang X. Tissue-autonomous function of Drosophila Seipin in preventing ectopic lipid accumulation. Plos Genetics 7(2011):e1001364.
152. Peng ZF, Chen MJ, Manikandan J, Melendez AJ, Shui G, Russo-Marie F, Whiteman M, Beart PM, Moore PK, Cheung NS. Multifaceted involvement of NO in mouse neuronal injury model: transcriptomic profiling defines the temporal recruitment of death signaling cascades. J Cell Mol Med: 16(2012):41-58
153. Gamage AM, Shui G, Wenk MR, Chua KL. N-octanoyl homoserine lactone is the major quorum signaling molecule regulating biofilm formation and antibiotic production in B. pseudomallei. Microbiology 157(2011): 1176-1186.
154. Blanc M, Watterson S, O’Sullivan MC,
Shui G, Gibbs H, Sing S, Khondoker M, Dickinson P, Lacaze P, Wall DM, Rodríguez-Martín S, Riemersma R, Wenk MR, Angulo A, Ghazal P.
Host defense against viral infection involves interferon mediated down-regulation of sterol biosynthesis. Plos Biology 9(2011): e1000598.
155. Cheng D, Jenner AM, Shui G, Cheong WF, Mitchell TW, Nealon JR, Kim WS, McCann H, Wenk MR, Halliday GM, Garner B. Lipid pathway alterations in Parkinson’s disease primary visual cortex. Plos One 6(2011): e17299.
156. Oliveira T, Chan R, Tian H, Laredo M, Shui G, Staniszewski A, Zhang H, Wang L, Kim TW, Duff K, Wenk MR, Arancio O and Di Paolo G. Phospholipase D2 ablation ameliorates Alzheimer’s disease-linked synaptic dysfunction and cognitive deficits. J. Neurosci. 30(2010), 16419-16428.
157.Shui G*, Guan XL, Gopalakrishnan P, Xue Y, Goh JSY, Yang H, Wenk MR Characterization of Substrate Preference for Slc1p and Cst26p in Saccharomyces cerevisiae Using Lipidomic Approaches and Non-radioactive LPAAT Activity Assay. Plos One 5(2010): e11956.
158. Low KL, Shui G, Natter K, Yeo WK, Kohlwein S, Dick T, Rao S, Wenk MR.. Lipid droplet-associated proteins in Mycobacterium bovis BCG function in the biosynthesis and hydrolysis of triacylglycerol. J. Bio. Chem. 285(2010):21662-70
159. Jenner AM, Lim WLF, Ng MPE, Wenk MR, Shui G, Sharman MJ, Gandy SE, Martins RN. The effect of APOE genotype on brain levels of oxysterols in young and old human APOE e2, e3 and e4 mice. Neurosciences 169(2010):109-15.
160.Shui G*, Guan XL, Low CP, Goh SYJ, Yang H, Wenk MR.. Toward One Step Analysis of Cellular Dynamic Lipidome Using Liquid Chromatography Coupled with Mass Spectrometry: Application to Saccharomyces Cerevisiae andSchizosaccharomyces Pombe Lipidomics. Mol BioSyst 6(2010):1008-17
161. Wu YT, Tan HL, Shui G, Bauvy C, Huang Q, Wenk MR, Ong CN, Codogno P, Shen HM. Dual role of 3-methyladenine on modulation of autophagy via different temporal patterns on Class I and III phosphoinositide 3-kinase. J. Bio. Chem.285(2010):10850-61
162. Sharman MJ#, Shui G#, Fernandis AZ, Lim WL, Berger T, Hone E, Taddei K, Martins IJ, Ghiso J, Buxbaum J, Gandy S, Wenk MR and Martins RN. Subtle changes in brain and plasma lipids in aged APOE knock-in mice. J Alzheimers Dis. 20(2010):105-11 (#Co-First Author)
163. Nakamura Y, Koizumi R, Shui G, Shimojima M, Wenk MR, Ito T, Ohta H. Arabidopsis lipins mediate eukaryotic pathway of lipid metabolism to/and cope critically with phosphate starvation. PNAS 106(2009):20978-83.
164. McGehee AM, Dougan SK, Klemm E, Shui G, Park B, Kim YM, Wenk MR, Ploegh HL, Hu CC. XBP-1-deficient plasmablasts have normal protein folding but defects in glycosylation and lipid synthesis. Journal of Immunology 183(2009):3690-3699.
165. Novem V, Shui G, Wang D, Bendt AK, Sim SH, Liu Y, Thong TW, Sivalingam SP, Ooi EE, Wenk MR, Tan G.Structural characterization and comparison of lipid A from Burkholderia pseudomallei and Burkholderia thailandensis. Clinical and Vaccine Immunology 16(2009):1420-1428
166. Low KL, Rao S, Shui G, Bendt AK, Pethe K, Dick T, Wenk MR. Tetrahydrolipstatin, a lipase inhibitor is bactericidal to non-replicative Mycobacterium bovis BCG. Journal of Bacteriol.: 191(2009):5037-43.
167. Deng Y, Almsherqi ZA, Shui G, Wenk MR, Kohlwein SD. Docosapentaenoic acid (DPA) is a critical determinant of cubic membrane formation in amoeba Chaos mitochondria. FASEB J. 23(2009):2866-71.
168. Lee HW, Shui G, Farooqui AQ, Wenk MR, Tan CH, Ong WY. Lipidomic analyses of the mouse brain after antidepressant treatment – evidence for endogenous release of omega-3 fatty acids? Int J Neuropsychopharmacol 12(2009) : 953-964
169. Kutik S, Rissler m, Guan X, Guiard B, Shui G, Meisinger G, Rehling P, Wenk MR, Pfanner N, Wiedemann N. The translocator maintenance protein Tam41 is required for mitochondrial cardiolipin biosynthesis. J Cell Biol. 183(2008):1213-1221.
170. Chan R, Uchil OD, Jin J, Shui G, Ott DE, Mothes W, and Wenk MR. Retroviruses Human Immunodeficiency Virus and Murine Leukemia Virus Are Enriched in Phosphoinositides. J Virol. 82(2008): 11228-38.
171. Low CP, Shui G, Li PL, Buttner S, Madeo F, Dawes IW, Wenk MR, and Yang H. Distinct lipotoxic cell death pathways in the fission yeast. J Cell Sci. 121(2008):2671-84.
172. Fei W, Shui G, Gaeta B, Du X, Kuerschner L, Li P, Brown AJ, Wenk MR, Parton RG, Yang H. Fld1p, a functional homologue of human seipin, regulates the size of lipid droplets in yeast. J Cell Biol. 180(2008):473-82.
173. Lu LE, Yung LYL, Ong CN, Tan YL, Balasubramaniam S, Hartono D, Shui G, Wenk MR, and Ong WY. Translocation and effects of gold nanoparticles after inhalation exposure in rats. Nanotoxicology 1 (2007), 235-242.
174.Shui G, Bendt AK, Pethe K, Dick T and Wenk MR. Sensitive profiling of chemically diverse bioactive lipids. J. Lipid Res. 48(2007):1976-84.
175. Wang H, Jenner A, Lee CY, Shui G, Tang SY, Whiteman M, Wenk MR, Halliwell B. The identification of antioxidants in dark soya sauce. Free Radical Res. 41(2007):479-88
176. Guan XL, He X, Ong WY, Yeo WK, Shui G. and Wenk MR. Unbiased global profiling of lipids during kainite induced neuronal injury. FASEB J. 20 (2006), 1152-61.
177. Huang Q, Shen HM, Shui G, Wenk MR, Wong CN. Emodin inhibits tumor cell adhesion through disruption of the membrane lipid rafts-associated integrin signaling pathway. Cancer Res. 66 (2006), 5807-15.
178.Shui G, Leong LP. Residue from star fruitJuice processing waste as a value-added food ingredient and its potential as antioxidant nutraceuticals. Food Chem. 97 (2006), 277-284.
179.Shui G, Leong LP. Rapid Screening and Identification of Antioxidants in Biological Samples Using High Performance Liquid Chromatography/Mass Spectrometry and Its Application on Salacca Edulis Reinw. J. Agric. Food Chem. (2005), 53(4), 880-886.
180.Shui G, Leong LP and Wong SP. “Rapid Screening and Characterisation of Antioxidants of Cosmos Caudatus Using Liquid Chromatography Coupled with Mass Spectrometry. J. Chromatogr. B. 827(2005), 127-138.
181.Shui G, Wong SP, Leong LP. Characterization of Antioxidants and Change of Antioxidant Levels during Storage of Manilkara zapota L. J. Agric. Food Chem. 52(2004), 7834-7841.
182.Shui G, Leong LP. An Improved Method for the Analysis of Major Antioxidants of Hibiscus Esculentus Linn. J. Chromatogr. A. 1048 (2004) 17-24.
183. Shui G, Leong LP. Analysis of Polyphenolic Antioxidants in Star Fruit Using High Performance Liquid Chromatography and Mass Spectrometry. J. Chromatogr. A. 1022 (2004) 67-75.
184. Shui G, Leong LP. Separation and Determination of Organic Acids and Phenolic Compounds of Fruit Juices and Drinks by High Performance Liquid Chromatography. J. Chromatogr. A 977 (2002) 89-97
185. Leong LP, Shui G. An Investigation of Antioxidant Capacity of fruits in the Singapore markets. Food Chem. 76(2002) 69-75.
