| |
Criteria for Annotation of Plant MicroRNAs
Blake C. Meyers,Michael J. Axtell,Bonnie Bartel,David P. Bartel,David Baulcombe,John L. Bowman,Xiaofeng Cao,James C. Carrington,Xuemei Chen,Pamela J. Green,Sam Griffiths-Jones,Steven E. Jacobsen,Allison C. Mallory,Robert A. Martienssen,R. Scott Poethig,Yijun Qi,Herve Vaucheret,Olivier Voinnet,Yuichiro Watanabe,Detlef Weigel,and Jian-Kang Zhu.
Plant Cell
Abstract
MicroRNAs (miRNAs) are  21 nucleotide noncoding RNAs produced by Dicer-catalyzed excision from stem-loop precursors. Many plant miRNAs play critical roles in development, nutrient homeostasis, abiotic stress responses, and pathogen responses via interactions with specific target mRNAs. miRNAs are not the only Dicer-derived small RNAs produced by plants: A substantial amount of the total small RNA abundance and an overwhelming amount of small RNA sequence diversity is contributed by distinct classes of 21- to 24-nucleotide short interfering RNAs. This fact, coupled with the rapidly increasing rate of plant small RNA discovery, demands an increased rigor in miRNA annotations. Herein, we update the specific criteria required for the annotation of plant miRNAs, including experimental and computational data, as well as refinements to standard nomenclature.
|
| 论文编号: |
DOI:10.1105/tpc.108.064311 |
| 论文题目: |
Criteria for Annotation of Plant MicroRNAs |
| 英文论文题目: |
Criteria for Annotation of Plant MicroRNAs |
| 第一作者: |
Blake C. Meyers,Michael J. Axtell,Bonnie Bartel,David P. Bartel,David Baulcombe,John L. Bowman,Xiaofeng Cao,James C. Carrington,Xuemei Chen,Pamela J. Green,Sam Griffiths-Jones,Steven E. Jacobsen,Allison C. Mallory,Robert A. Martienssen,R. Scott Poethig,Yijun Qi,Herve Vaucheret,Olivier Voinnet,Yuichiro Watanabe,Detlef Weigel,and Jian-Kang Zhu. |
| 英文第一作者: |
Blake C. Meyers,Michael J. Axtell,Bonnie Bartel,David P. Bartel,David Baulcombe,John L. Bowman,Xiaofeng Cao,James C. Carrington,Xuemei Chen,Pamela J. Green,Sam Griffiths-Jones,Steven E. Jacobsen,Allison C. Mallory,Robert A. Martienssen,R. Scott Poethig,Yijun Qi,Herve Vaucheret,Olivier Voinnet,Yuichiro Watanabe,Detlef Weigel,and Jian-Kang Zhu. |
| 联系作者: |
|
| 英文联系作者: |
|
| 外单位作者单位: |
|
| 英文外单位作者单位: |
|
| 发表年度: |
2008-12-16 |
| 卷: |
|
| 期: |
|
| 页码: |
|
| 摘要: |
MicroRNAs (miRNAs) are  21 nucleotide noncoding RNAs produced by Dicer-catalyzed excision from stem-loop precursors. Many plant miRNAs play critical roles in development, nutrient homeostasis, abiotic stress responses, and pathogen responses via interactions with specific target mRNAs. miRNAs are not the only Dicer-derived small RNAs produced by plants: A substantial amount of the total small RNA abundance and an overwhelming amount of small RNA sequence diversity is contributed by distinct classes of 21- to 24-nucleotide short interfering RNAs. This fact, coupled with the rapidly increasing rate of plant small RNA discovery, demands an increased rigor in miRNA annotations. Herein, we update the specific criteria required for the annotation of plant miRNAs, including experimental and computational data, as well as refinements to standard nomenclature. |
| 英文摘要: |
MicroRNAs (miRNAs) are  21 nucleotide noncoding RNAs produced by Dicer-catalyzed excision from stem-loop precursors. Many plant miRNAs play critical roles in development, nutrient homeostasis, abiotic stress responses, and pathogen responses via interactions with specific target mRNAs. miRNAs are not the only Dicer-derived small RNAs produced by plants: A substantial amount of the total small RNA abundance and an overwhelming amount of small RNA sequence diversity is contributed by distinct classes of 21- to 24-nucleotide short interfering RNAs. This fact, coupled with the rapidly increasing rate of plant small RNA discovery, demands an increased rigor in miRNA annotations. Herein, we update the specific criteria required for the annotation of plant miRNAs, including experimental and computational data, as well as refinements to standard nomenclature. |
| 刊物名称: |
Plant Cell |
| 英文刊物名称: |
Plant Cell |
| 论文全文: |
|
| 英文论文全文: |
|
| 全文链接: |
|
| 其它备注: |
Blake C. Meyers,Michael J. Axtell,Bonnie Bartel,David P. Bartel,David Baulcombe,John L. Bowman,Xiaofeng Cao,James C. Carrington,Xuemei Chen,Pamela J. Green,Sam Griffiths-Jones,Steven E. Jacobsen,Allison C. Mallory,Robert A. Martienssen,R. Scott Poethig,Yijun Qi,Herve Vaucheret,Olivier Voinnet,Yuichiro Watanabe,Detlef Weigel,and Jian-Kang Zhu. Criteria for Annotation of Plant MicroRNAs. Plant Cell. DOI:10.1105/tpc.108.064311 |
| 英文其它备注: |
|
| 学科: |
|
| 英文学科: |
|
| 影响因子: |
|
| 第一作者所在部门: |
|
| 英文第一作者所在部门: |
|
| 论文出处: |
|
| 英文论文出处: |
|
| 论文类别: |
|
| 英文论文类别: |
|
| 参与作者: |
|
| 英文参与作者: |
|
|